A Doctor, a Mutation and a Potential Cure for AIDS

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Gerald Tarrant
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A Doctor, a Mutation and a Potential Cure for AIDS

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The startling case of an AIDS patient who underwent a bone marrow transplant to treat leukemia is stirring new hope that gene-therapy strategies on the far edges of AIDS research might someday cure the disease.

The patient, a 42-year-old American living in Berlin, is still recovering from his leukemia therapy, but he appears to have won his battle with AIDS. Doctors have not been able to detect the virus in his blood for more than 600 days, despite his having ceased all conventional AIDS medication. Normally when a patient stops taking AIDS drugs, the virus stampedes through the body within weeks, or days.

"I was very surprised," said the doctor, Gero Hütter.

The breakthrough appears to be that Dr. Hütter, a soft-spoken hematologist who isn't an AIDS specialist, deliberately replaced the patient's bone marrow cells with those from a donor who has a naturally occurring genetic mutation that renders his cells immune to almost all strains of HIV, the virus that causes AIDS.

The development suggests a potential new therapeutic avenue and comes as the search for a cure has adopted new urgency. Many fear that current AIDS drugs aren't sustainable. Known as antiretrovirals, the medications prevent the virus from replicating but must be taken every day for life and are expensive for poor countries where the disease runs rampant. Last year, AIDS killed two million people; 2.7 million more contracted the virus, so treatment costs will keep ballooning.


While cautioning that the Berlin case could be a fluke, David Baltimore, who won a Nobel prize for his research on tumor viruses, deemed it "a very good sign" and a virtual "proof of principle" for gene-therapy approaches. Dr. Baltimore and his colleague, University of California at Los Angeles researcher Irvin Chen, have developed a gene therapy strategy against HIV that works in a similar way to the Berlin case. Drs. Baltimore and Chen have formed a private company to develop the therapy.

Back in 1996, when "cocktails" of antiretroviral drugs were proved effective, some researchers proposed that all cells harboring HIV might eventually die off, leading to eradication of HIV from the body -- in short, a cure. Those hopes foundered on the discovery that HIV, which integrates itself into a patient's own DNA, hides in so-called "sanctuary cells," where it lies dormant yet remains capable of reigniting an infection.

But that same year, researchers discovered that some gay men astonishingly remained uninfected despite engaging in very risky sex with as many as hundreds of partners. These men had inherited a mutation from both their parents that made them virtually immune to HIV.

The mutation prevents a molecule called CCR5 from appearing on the surface of cells. CCR5 acts as a kind of door for the virus. Since most HIV strains must bind to CCR5 to enter cells, the mutation bars the virus from entering. A new AIDS drug, Selzentry, made by Pfizer Inc., doesn't attack HIV itself but works by blocking CCR5.


About 1% of Europeans, and even more in northern Europe, inherit the CCR5 mutation from both parents. People of African, Asian and South American descent almost never carry it.

Dr. Hütter, 39, remembered this research when his American leukemia patient failed first-line chemotherapy in 2006. He was treating the patient at Berlin's Charité Medical University, the same institution where German physician Robert Koch performed some of his groundbreaking research on infectious diseases in the 19th century. Dr. Hütter scoured research on CCR5 and consulted with his superiors.

Finally, he recommended standard second-line treatment: a bone marrow transplant -- but from a donor who had inherited the CCR5 mutation from both parents. Bone marrow is where immune-system cells are generated, so transplanting mutant bone-marrow cells would render the patient immune to HIV into perpetuity, at least in theory.

There were a total of 80 compatible blood donors living in Germany. Luckily, on the 61st sample he tested, Dr. Hütter's colleague Daniel Nowak found one with the mutation from both parents.

To prepare for the transplant, Dr. Hütter first administered a standard regimen of powerful drugs and radiation to kill the patient's own bone marrow cells and many immune-system cells. This procedure, lethal to many cells that harbor HIV, may have helped the treatment succeed.

The transplant specialists ordered the patient to stop taking his AIDS drugs when they transfused the donor cells, because they feared the powerful drugs might undermine the cells' ability to survive in their new host. They planned to resume the drugs once HIV re-emerged in the blood.

But it never did. Nearly two years later, standard tests haven't detected virus in his blood, or in the brain and rectal tissues where it often hides.

The case was presented to scientists earlier this year at the Conference on Retroviruses and Opportunistic Infections. In September, the nonprofit Foundation for AIDS Research, or amFAR, convened a small scientific meeting on the case. Most researchers there believed some HIV still lurks in the patient but that it can't ignite a raging infection, most likely because its target cells are invulnerable mutants. The scientists agreed that the patient is "functionally cured."

Caveats are legion. If enough time passes, the extraordinarily protean HIV might evolve to overcome the mutant cells' invulnerability. Blocking CCR5 might have side effects: A study suggests that people with the mutation are more likely to die from West Nile virus. Most worrisome: The transplant treatment itself, given only to late-stage cancer patients, kills up to 30% of patients. While scientists are drawing up research protocols to try this approach on other leukemia and lymphoma patients, they know it will never be widely used to treat AIDS because of the mortality risk.


There is a potentially safer alternative: Re-engineering a patient's own cells through gene therapy. Due to some disastrous failures, gene therapy now "has a bad name," says Dr. Baltimore. In 1999, an 18-year-old patient died in a gene therapy trial. Even one of gene therapy's greatest successes -- curing children of the inherited "bubble boy" disease -- came at the high price of causing some patients to develop leukemia.

Gene therapy also faces daunting technical challenges. For example, the therapeutic genes are carried to cells by re-engineered viruses, and they must be made perfectly safe. Also, most gene therapy currently works by removing cells, genetically modifying them out of the body, then transfusing them back in -- a complicated procedure that would prove too expensive for the developing world. Dr. Baltimore and others are working on therapeutic viruses they could inject into a patient as easily as a flu vaccine. But, he says, "we're a long way from that."

Expecting that gene therapy will eventually play a major role in medicine, several research groups are testing different approaches for AIDS. At City of Hope cancer center in Duarte, Calif., John Rossi and colleagues actually use HIV itself, genetically engineered to be harmless, to deliver to patients' white blood cells three genes: one that inactivates CCR5 and two others that disable HIV. He has already completed the procedure on four patients and may perform it on another.

One big hurdle: doctors can't yet genetically modify all target cells. In theory, HIV would kill off the susceptible ones and, a victim of its own grim success, be left only with the genetically engineered cells that it can't infect. But so far that's just theory. All Dr. Rossi's patients remain on standard AIDS drugs, so it isn't yet known what would happen if they stopped taking them.

In 1989, Dr. Rossi had a case eerily similar to the one in Berlin. A 41-year-old patient with AIDS and lymphoma underwent radiation and drug therapy to ablate his bone marrow and received new cells from a donor. It is not known if those cells had the protective CCR5 mutation, because its relation to HIV hadn't been discovered yet. But after the transplant, HIV disappeared from the patient's blood. The patient died of his cancer 47 days after the procedure. Autopsy tests from eight organs and the tumor revealed no HIV.
Wall Street Journal

The CCR5 thing was new to me, I'd had no idea that anyone had any sort of immunity to AIDS. It's amazing that this treatment opened up new avenues of research.
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Re: A Doctor, a Mutation and a Potential Cure for AIDS

Post by mr friendly guy »

HIV needs various co-receptors to enter cells. One of these being CCR5. Drugs are already in existence which work by blocking CCR5.

Examples include
Maraviroc and
Vicriviroc

And yeah, there are some strains which don't use CCR5 so this mutation doesn't help with those.

Now back to the OP, what can I say. It is an interesting avenue of research.
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Re: A Doctor, a Mutation and a Potential Cure for AIDS

Post by Broomstick »

There are at least two genetic mutations that render a person immune to HIV - one is from Europe (discovered in gay men), one from Africa (discovered in prostitutes).

This is fortunate because bone marrow transplants seldom cross racial lines. And that, right there, is a major problem with this treatment. I don't know if an Asia variant of immunity has been found. Even if it was, it is unlikely to be present in all Asian populations. Donor and recipient must have a certain level of compatibility (plus, you need enough donors able/willing to donate to cover compatibility recipients). This can help some but not all people with HIV.
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Re: A Doctor, a Mutation and a Potential Cure for AIDS

Post by Mayabird »

I'd heard about the African prostitutes, but I also thought it was an immune system quirk they had due to their constant high levels of exposure to pathogens. IIRC the reports said that if they stopped prostituting for a period of time (say, a year) and then started back up again, they had already lost their immunity and were at a very high risk of contracting HIV. Did I read it incorrectly?

Also, just to nitpick for the purpose of everyone else who doesn't know about CCR5, it's not just found in gay men. In my evolution course, one of the first lectures mentioned it and we had a discussion about if it had spread in the northern European population because it provided some benefit to its bearers (immunity to some other epidemic disease, for instance; seriously, West Nile isn't all that prevalent) or if it was just a founder effect - someone moving into the region way back when just so happened to have this particular mutation, and he or she had a whole bunch of kids who had a bunch of kids and populated the area. (I forget what the conclusion was, if there was a conclusion, because this might have been the first time I started sparring with the idiot creationist in the class).
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Re: A Doctor, a Mutation and a Potential Cure for AIDS

Post by Broomstick »

Mayabird wrote:I'd heard about the African prostitutes, but I also thought it was an immune system quirk they had due to their constant high levels of exposure to pathogens. IIRC the reports said that if they stopped prostituting for a period of time (say, a year) and then started back up again, they had already lost their immunity and were at a very high risk of contracting HIV. Did I read it incorrectly?
Possibly. Or maybe not. There IS a mutation in Africa that protects against HIV, and it's not surprising it was found in a subset of prostitutes as they are at such high risk that immunity would stand out clearly against the background level of infection. A genetic protection would not, of course, be limited to prostitutes it's just that that is where it was discovered.

It is also possible there is some other mechanism functioning as you mentioned, providing protection during times of high exposure but dropping off if that rate of exposure ceases, leaving the person vulnerable. The immune system is very complex and uses multiple methods of combatting illness.
Also, just to nitpick for the purpose of everyone else who doesn't know about CCR5, it's not just found in gay men.
Of course not - I gave the board readers credit for being able to assume that. It was discovered among gay men for the same reason the African variant was discovered among prostitutes - in a population with high risk and high exposure the immune individuals stand out clearly.
In my evolution course, one of the first lectures mentioned it and we had a discussion about if it had spread in the northern European population because it provided some benefit to its bearers (immunity to some other epidemic disease, for instance; seriously, West Nile isn't all that prevalent) or if it was just a founder effect - someone moving into the region way back when just so happened to have this particular mutation, and he or she had a whole bunch of kids who had a bunch of kids and populated the area. (I forget what the conclusion was, if there was a conclusion, because this might have been the first time I started sparring with the idiot creationist in the class).
There is some evidence (though not conclusive) that the CCR5 mutation protects against Yersinia pestis, bubonic plague a.k.a. the Black Death which, as we all know, swept through Europe several times in the past.
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Re: A Doctor, a Mutation and a Potential Cure for AIDS

Post by Gerald Tarrant »

Broomstick wrote: This is fortunate because bone marrow transplants seldom cross racial lines. And that, right there, is a major problem with this treatment. I don't know if an Asia variant of immunity has been found. Even if it was, it is unlikely to be present in all Asian populations. Donor and recipient must have a certain level of compatibility (plus, you need enough donors able/willing to donate to cover compatibility recipients). This can help some but not all people with HIV.
The additional problem with Bone Marrow Transplants is they're risky. That's the reason they're a second tier solution for leukemia, it's better to try chemo first (if the odds are high enough, as in various strains of ALL). Also as the article noted Gene therapy still has its risks, I'm pretty sure various anti-retrovirals are going to continue to be the main treatment for at least a decade. But this is a promising start.

And since Bone Marrow is a stem cell of a sort, additional Stem Cell Research in this area could be very interesting. Lifting the Federal funding ban on Stem Cells is one of those President Obama executive orders I'm looking forward to.
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Re: A Doctor, a Mutation and a Potential Cure for AIDS

Post by Mayabird »

Broomstick wrote:
Mayabird wrote:I'd heard about the African prostitutes, but I also thought it was an immune system quirk they had due to their constant high levels of exposure to pathogens. IIRC the reports said that if they stopped prostituting for a period of time (say, a year) and then started back up again, they had already lost their immunity and were at a very high risk of contracting HIV. Did I read it incorrectly?
Possibly. Or maybe not. There IS a mutation in Africa that protects against HIV, and it's not surprising it was found in a subset of prostitutes as they are at such high risk that immunity would stand out clearly against the background level of infection. A genetic protection would not, of course, be limited to prostitutes it's just that that is where it was discovered.

It is also possible there is some other mechanism functioning as you mentioned, providing protection during times of high exposure but dropping off if that rate of exposure ceases, leaving the person vulnerable. The immune system is very complex and uses multiple methods of combatting illness.
I've been trying to find some articles about the protective mutation in Africa, but I haven't found anything. I did find an article about two Chinese women who appear to have a genetic HIV immunity and also a few different older articles about African prostitutes who stayed immune despite high exposure, though it turns out my time was a bit wrong - just a break of two months is enough to destroy their immunity.

A few blurbs I was able to catch (with the rest of the articles being pay-per-view) said that the hypothesis about the prostitutes is that their immune systems are constantly producing huge amounts of killer T-cells and never lessening the amount of them because they're constantly being exposed, so new infections are never able to get established and move to reservoirs because they're destroyed so quickly. I wonder how they managed to get past their first infection since their bodies wouldn't have been prepped for it beforehand; could just be luck, I suppose, considering the number of women who aren't so lucky, but to see what the experts say, I'd have to pay for the articles.
Also, just to nitpick for the purpose of everyone else who doesn't know about CCR5, it's not just found in gay men.
Of course not - I gave the board readers credit for being able to assume that. It was discovered among gay men for the same reason the African variant was discovered among prostitutes - in a population with high risk and high exposure the immune individuals stand out clearly.


Just wanting to make sure everybody knew, since we've been having that big shitstorm and homosexuality's biological components have been brought up a lot.
In my evolution course, one of the first lectures mentioned it and we had a discussion about if it had spread in the northern European population because it provided some benefit to its bearers (immunity to some other epidemic disease, for instance; seriously, West Nile isn't all that prevalent) or if it was just a founder effect - someone moving into the region way back when just so happened to have this particular mutation, and he or she had a whole bunch of kids who had a bunch of kids and populated the area. (I forget what the conclusion was, if there was a conclusion, because this might have been the first time I started sparring with the idiot creationist in the class).
There is some evidence (though not conclusive) that the CCR5 mutation protects against Yersinia pestis, bubonic plague a.k.a. the Black Death which, as we all know, swept through Europe several times in the past.
I've also heard smallpox and typhus brought up as possibilities. Could be a combination or all three; it's not like smallpox was going to stop killing people just because bubonic plague showed up.
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