MKSheppard wrote:
I'm afraid you don't know just how X-Files MIB operate, specifically C.G.B. Spender (Cancer Man/Cigarette Smoking Man). He's basically at the top; and can basically order just about anything -- he for example shot Kennedy, then Martin Luther King personally as a younger agent.
So some of Mulder's contacts (specifically The Lone Gunmen) claimed. I don't think it was ever confirmed weather that was really what happened. Just rumors after the fact.
It is true that the Cigarette Smoking Man has a lot of power and wide reaching authority, but he's not above everyone else. Even at the height of his authority, he had to take orders from other members of the conspiracy, and for most of Season Five and in Season Seven onward (when the original coverup had been destroyed and replaced by another organization), his authority was, to my best recollection, basically nil.
His jurisdiction is essentially unlimited. Basically, the only reason Mulder and Scully aren't disappeared is because CGB has a soft spot for Bill Mulder's son.
Well, the official reason is that he doesn't want to turn Mulder into a martyr by killing him, but I don't know how plausible that is. He was also being blackmailed by Mulder and Scully's boss back in season three, but I forget how long that lasted.
Edit: Finally, Lord of the Abyss is right that it would be a losing fight for the conspirators. They can't risk exposure, and since as I recall one of the reasons that Dresden originally kept Murphy in the Dark about the White Council is that they might kill her if they found out she knew, I imagine the same would be true ten times over for CSM and company.
Of course, if the aliens who are ultimately behind the coverup get involved, all bets are off. The wizards would be facing down Supersoldiers, shapeshifting bounty hunters, and the Black Oil creature, among other things. Not sure how that would turn out.